YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	HIG1A_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTNTDLSLS SYDEGQGSKF IRKAKETPFV PIGMAGFAAI VAYGLYKLKS RGNTKMSIHL  60
   61 IHMRVAAQGF VVGAMTLGMG YSMYQEFWAN PKPKP

Type	Start	End	Confidence
Cytoplasmic	1	26	0.52
Transmembrane Helix	27	46	0.88
Non-Cytoplasmic	47	59	0.43
Transmembrane Helix	60	84	0.82
Cytoplasmic	85	95	0.44