YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|14290579
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGPRVFPLS CVVQQYAWGK VGSKSEVACL LASSDPLAQI SEDKPYAELW MGTHPRGDAK  60
   61 ILDNRISQKT LGQWIAENPD CLGSKVKNTF NGKLPFLFKV LSVDTALSIQ AHPNKELAEK 120
  121 LHLQAPEHYP DANHKPEMAI ALTSFQGLCG FRPVEEIVTF MKKVPEFQLL IGDDATAQLK 180
  181 ESVGGDTEAM ASALRNCFSH LMKSEKKVVV EQLNLLVKRI SQQVFDGNNM EDIYGKLLLQ 240
  241 LHQQHPGDIG CFAIYFLNLL TLKPGEAMFL DANVPHAYLK GDCVECMACS DNTVRAGLTP 300
  301 KFIDVPTLCE MLNYTPSPSN DRLFAPAQSQ DDPYLSIYDP PVPDFTVMKM EVPSSVTEYK 360
  361 VSTLDSASIL LVVQGTVTAI IPSAHAEIPL YRGGVLFIAA NESVLLKITV PKDLLIFRAC 420
  421 CLL

Type	Start	End	Confidence
Signal Peptide	1	19	0.54
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	423	0.99