YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|30794460, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.82
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEKEEPDC QKQFQAAVSV IQNLPKNGSY RPSYEEMLRF YSYYKQATMG PCLVPRPGFW  60
   61 DPIGRYKWDA WNRLGKMSRE EAMSAYISEM KLVAQKVIDT VPLGEVAEDM FGYFEPLYQV 120
  121 IPDMPRPPET FLRRATGWKE PLVQREDQAA PEPSCVPKEP VPPSPESRPP RDLDLEVFCD 180
  181 SVEQLEPELV RLPVLSPVAA EPELCHLPPG IWDSSAQQVW AEQKEAAGRE LTTRSSPEST 240
  241 GEKEGLGGGL IGPQELDTWL VGTVRAMQES MKDVHRRLQS LESKPQPLKQ RSPRTRPWPL 300
  301 GLSVPTLLFF ILWPFVVQWL FRQFRTQKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	297	0.85
Transmembrane Helix	298	321	0.89
Cytoplasmic	322	329	0.82