YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PGRC2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.98
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GDGDVKLSTL GSGGESGGDG SPGGAGATAA RSSWVAALLA TGGEMLLNVA LVALVLLGAY  60
   61 RLWVRWGRRG LCSGPGAGEE SPAATLPRMK KRDFSLEQLR QYDGARTPRI LLAVNGKVFD 120
  121 VTKGSKFYGP AGPYGIFAGR DASRGLATFC LDKDALRDEY DDLSDLNAVQ MESVREWEMQ 180
  181 FKEKYDYVGR LLKPGEEPSE YTDEEDTKDH SKQD

Type	Start	End	Confidence
Non-Cytoplasmic	1	36	0.80
Transmembrane Helix	37	60	0.84
Cytoplasmic	61	214	0.85