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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28972684
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.91
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 REPVSGQEGC VAEPRSPGAL RSRPWSLPAT GRCRLAQVQR LSDQTMETLL GGLLAFGMAF  60
   61 AVVDACPKYC VCQNLSESLG TLCPSKGLLF VPPDIDRRTV ELRLGGNFII HIGRQDFANM 120
  121 TGLVDLTLSR NTISHIQPFS FLDLESLRSL HLDSNRLPSL GEDTLRGLVN LQHLIVNNNQ 180
  181 LGGIADDAFE DFLLTLEDLD LSYNNLHGLP WDSVRRMVNL HQLSLDHNLL DHIAEGTFAD 240
  241 LQKLARLDLT SNRLQKLPPD PIFARSQASL LTATPFAPPL SFSFGGNPLH CNCELLWLRR 300
  301 LERDDDLETC GSPGSLKGRY FWHIREEEFV CEPPLITQHT HKLLVLEGQA ATLKCKAIGD 360
  361 PSPLIHWVAP DDRLVGNSSR TAVYDNGTLD ILITTSQDSG PFTCIAANAA GEATATVEVS 420
  421 IVQLPHLSNS TSRMAPPKSR LSDITGSSKT SRGGGGSGAG EPPKSTPERA VLVSDVTTTS 480
  481 ALVKWSVSKS APRVKMYQLQ YNCSDDEVLI YRMIPASNKA FVVNNLVSGT GYDLCVLAMW 540
  541 DDTATTLTAT NIVGCAQFFT KADYPQCQSM HSQILGGTMI LVIGGIIVAT LLVFIVILMV 600
  601 RYKVCNHDTP GKMAAATVSN VYSQTNGSQP PPLGGIPVGQ LPQAPPKVVV RNELMDFSTS 660
  661 LARACDSSSS SSLGSGEAAG LGRGPWRLPP PAPRPKPSLD RLMGAFASLD LKSQRKEELL 720
  721 DSRTPAGRGA GTSSRGHHSD REPLLGPPAT RARSLLPLPL EGKAKRSHSF DMGDFAAAAA 780
  781 AVPGGYSPPR RVSNIWTKRS LSVNGMLLPF EESDLVGARG TFGSSEWVME STV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle