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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|28274695, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKRWLPSLA LLPLPPPLLL LLLLLLPTNA SAPQKPIYMV MVPSLLHAGT PEKGCLLFNH  60
   61 LNETVTVKVS MESVRGNQSL FTDLVVDKDL FHCASFIVPQ SSSNEVMFLT VQVKGPTHEF 120
  121 RRRSTVLIKT KESLVFAQTD KPIYKPGQMV RFRVVSLDEN FHPLNELIPL LYIQDSKKNR 180
  181 IAQWQNFRLE GGLKQLSFPL SSEPTQGSYK VVIRTESGRT VEHPFSVKEF VLPKFEVKVA 240
  241 VPETITILEE EMNVSVCGIY TYGKPVPGHV TVNICRKYSN PSSCFGEESL AFCEKFSQQL 300
  301 DGRGCFSQLV KTKSFQLKRQ EYEMQLDVNA KIQEEGTGVE ETGKGLTKIT RTITKLSFVN 360
  361 VDTHFGQGIP FVGQVLLVDG RGTPIPYEMI FIGADEANQN INTTTDKNGL ARFSINTDDI 420
  421 MGTSLTVRAK YKDSNVCYGF RWLTEENVEA WRTANAVFSP SRSFVHLESL PYKLRCEQTL 480
  481 AVQAHYILND EAVLERKELV FYYLMMAKGG IVRAGTHVLP VTQGHKKGHF SILISMETDL 540
  541 APVARLVLYT ILPNGEVVGD TVKYEIEKCL ANKVDLVFHP NIGLPATRAF LSVMASPQSL 600
  601 CGLRAVDQSV LLTKPEAELS ASLVYDLLPV KDLTGFPKGV NQQEEDTNGC LKQNDTYIRN 660
  661 PVLPRQNTNE EDMYGFLKDM GLKVFTNLNI RKPKVCERLG VNKIPAAYHL VSQGHMDAFL 720
  721 ESSESPTETT RSYFPETWIW DLVIVDSTGV AEMEVTVPDT ITEWKAGAFC LSNDTGLGLS 780
  781 PVIDFQAFQP FFVDLTMPYS VIRGEAFTLK ATVLNYLQTC IRVGVQLEAS PDFLATPEEK 840
  841 EQKSHCICMN ERHTMSWAVI PKSLGNVNFT VSAEALDSKE LCRNEVPVVP ERGKKDTIIK 900
  901 SLLVEPEGLE NEVTFNSLLC PTGAEVSEQI SLKLPSDVVE ESARASVTVL GDILGSAMQN 960
  961 TQDLLKMPYG CGEQNMVLFA PNIYVLDYLN ETEQLTQEIK TKAITYLNTG YQRQLNYKHR1020
 1021 DGSYSTFGDK PGRSHANTWL TAFVLKSFAQ ARRYIFIDES HITQALTWLS QQQKDNGCFR1080
 1081 SSGSLLNNAM KGGVEDEVTL SAYITIALLE MSLPVTHPVV RNALFCLDTA WKSARRGASG1140
 1141 NHVYTKALLA YAFALAGNQD TKKEILKSLD EEAVKEDNSV HWTRAQKPRV PADLWYQPQA1200
 1201 PSAEVEMTAY VLLAYLTTEL VPTREDLTAA MLIVKWLTKQ QNSHGGFSST QDTVVALHAL1260
 1261 SKYGAATFTR AKKAAHVTIQ SSGAFYTKFQ VNNDNQLLLQ RVTLPTVPGD YTAKVAGEGC1320
 1321 VYLQTSLKYS VLPREKEFPF ALVVQTLPGT CEDLKAHTTF QISLNISYIG SRSDSNMAIA1380
 1381 DVKMVSGFIP LKPTVKMLER SVHVSRTEVS NNHVLIYLDK VSNQMLTLFF MVQQDIPVRD1440
 1441 LKPAIVKVYD YYEKDEFAVA KYSAPCSAGY GNA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle