YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|29437340
Protein type:	Globular with Signal Peptide
Type Confidence:	0.75
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLSASTPAV AVQTSNASNR QTASPPSGCP MHEGKVKGCP VSAEPSDPTC ENKMSSVPAH  60
   61 QDRAYEYVEC PVTGAMAENK ENLDPSNLMP PPNQMPAPDQ PFALSTVREE SSIPRADSEK 120
  121 KWVYPSEQMF WNAMLRKGWK WKDDDISQKD MYNIIRIHNQ NNEQAWKEIL KWEALHAAEC 180
  181 PCGPSLIRFG GKAKEYSPRA RIRSWMGYEL PFDRHDWIIN RCGTEVRYVI DYYDGGEVNQ 240
  241 DYQFTILDVR PALDSFSAVW DRMKVAWWRW TS

Type	Start	End	Confidence
Signal Peptide	1	17	0.75
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	272	0.99