YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	I11RB_MOUSE
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSCSGLTR VLVAVATALV SSSSPCPQAW GPPGVQYGQP GRPVMLCCPG VSAGTPVSWF  60
   61 RDGDSRLLQG PDSGLGHRLV LAQVDSPDEG TYVCQTLDGV SGGMVTLKLG FPPARPEVSC 120
  121 QAVDYENFSC TWSPGQVSGL PTRYLTSYRK KTLPGAESQR ESPSTGPWPC PQDPLEASRC 180
  181 VVHGAEFWSE YRINVTEVNS LGASTCLLDV RLQSILRPDP PQGLRVESVP GYPRRLHASW 240
  241 TYPASWRRQP HFLLKFRLQY RPAQHPAWST VEPIGLEEVI TDTVAGLPHA VRVSARDFLD 300
  301 AGTWSAWSPE AWGTPSTGLL QDEIPDWSQG HGQQLEAVVA QEDSLAPARP SLQPDPRPLD 360
  361 HRDPLEQVAV LASLGIFSCL GLAVGALALG LWLRLRRSGK EGPQKPGLLA PMIPVEKLPG 420
  421 IPNLQRTPEN FS

Type	Start	End	Confidence
Signal Peptide	1	29	0.95
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	368	0.99
Transmembrane Helix	369	393	0.90
Cytoplasmic	394	432	0.98