YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FV1_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFPRALAGF SSWLFKPELA EDSPDNDSPD NDTVNPWREL LQKINVADLP DSSFSSGKEL  60
   61 NDSVYHTFEH FCKIRDYDAV GELLLAFLDK VTKERDQFRD EISQLRMHIN DLKASKCVLG 120
  121 ETLLSYRHRI EVGEKQTEAL IVRLADVQSQ VMCQPARKVS ADKVRALIGK EWDPVTWDGD 180
  181 VWEDIDSEGS EEAELPTVLA SPSLSEESGY ALSKERTQQD KADAPQIQSS TSLVTSEPVT 240
  241 RPKSLSDLTS QKHRHTNHEL NSLAHSNRQK AKEHARKWIL RVWDNGGRLT ILDQIEFLSL 300
  301 GPLSLDSEFN VIARTVEDNG VKSLFDWLAE AWVQRWPTTR ELQSPDTLEW YSIEDGIERL 360
  361 RELGMIEWLC VKATCPQWRG PEDVPITRAM RITFVRETRE TWKSFVFSLL CIKDITVGSV 420
  421 AAQLHDLIEL SLKPTAAGLT SVGSVGVLSL SPWKHQSNS

Type	Start	End	Confidence
Signal Peptide	1	20	0.81
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	459	0.98