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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATP4A_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKEKYELYS VELGSGPGGD MTAKMSKKKA GGGGGKKKEK LENMKKEMEI NDHQLSVSEL  60
   61 EQKYQTSATK GLKASLAAEL LLRDGPNALR PPRGTPEYVK FARQLAGGLQ CLMWVAAAIC 120
  121 LIAFAIQASE GDLTTDDNLY LAVALIAVVV VTGCFGYYQE FKSTNIIASF KNLVPQQATV 180
  181 IRDGDKFQIN ADQLVVGDLV EMKGGDRVPA DIRILSAQGC KVDNSSLTGE SEPQTRSPEC 240
  241 THESPLETRN IAFFSTMCLE GTAQGLVVST GDRTIIGRIA SLASGVENEK TPIAIEIEHF 300
  301 VDIIAGLAIL FGATFFVVAM CIGYTFLRAM VFFMAIVVAY VPEGLLATVT VCLSLTAKRL 360
  361 ASKNCVVKNL EAVETLGSTS VICSDKTGTL TQNRMTVSHL WFDNHIHTAD TTEDQSGQTF 420
  421 DQSSETWRAL CRVLTLCNRA AFKSGQDAVP VPKRIVIGDA SETALLKFSE LTLGNAMGYR 480
  481 DRFPKVCEIP FNSTNKFQLS IHTLEDPRDS RHLLVMKGAP ERVLERCSSI LIKGQELPLD 540
  541 EQWREAFQTA YLSLGGLGER VLGFCQLYLN EKDYPPGYAF DVEAMNFPSS GLCFAGLVSM 600
  601 IDPPRATVPD AVLKCRTAGI RVIMVTGDHP ITAKAIAASV GIISEGSETV EDIAARLRMP 660
  661 VDQVNRKDAR ACVINGMQLK DMDPSELVEA LRTHPEMVFA RTSPQQKLVI VESCQRLGAI 720
  721 VAVTGDGVND SPALKKADIG VAMGIAGSDA AKNAADMILL DDNFASIVTG VEQGRLIFDN 780
  781 LKKSIAYTLT KNIPELTPYL IYITVSVPLP LGCITILFIE LCTDIFPSVS LAYEKAESDI 840
  841 MHLRPRNPKR DRLVNEPLAA YSYFQIGAIQ SFAGFADYFT AMAQEGWFPL LCVGLRPQWE 900
  901 DHHLQDLQDS YGQEWTFGQR LYQQYTCYTV FFISIEMCQI ADVLIRKTRR LSVFQQGFFR 960
  961 NKILVIAIVF QVCIGCFLCY CPGMPNIFNF MPIRFQWWLV PMPFGLLIFV YDEIRKLGVR1020
 1021 CCPGSWWDQD FYY

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle