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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|94380876, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.98
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSHQILLLLA MLTLGLAISQ RREQVPCRTV NKEALCHGLG LLQVPSVLSL DIQALYLSGN  60
   61 QLQSILVSPL GFYTALRHLD LSDNQISFLQ AGVFQALPYL EHLNLAHNRL ATGMALNSGG 120
  121 LGRLPLLVSL DLSGNSLHGN LVERLLGETP RLRTLSLAEN SLTRLARHTF WGMPAVEQLD 180
  181 LHSNVLMDIE DGAFEALPHL THLNLSRNSL TCISDFSLQQ LQVLDLSCNS IEAFQTAPEP 240
  241 QAQFQLAWLD LRENKLLHFP DLAVFPRLIY LNVSNNLIQL PAGLPRGSED LHAPSEGWSA 300
  301 SPLSNPSRNA STHPLSQLLN LDLSYNEIEL VPASFLEHLT SLRFLNLSRN CLRSFEARQV 360
  361 DSLPCLVLLD LSHNVLEALE LGTKVLGSLQ TLLLQDNALQ ELPPYTFASL ASLQRLNLQG 420
  421 NQVSPCGGPA EPGPPGCVDF SGIPTLHVLN MAGNSMGMLR AGSFLHTPLT ELDLSTNPGL 480
  481 DVATGALVGL EASLEVLELQ GNGLTVLRVD LPCFLRLKRL NLAENQLSHL PAWTRAVSLE 540
  541 VLDLRNNSFS LLPGNAMGGL ETSLRRLYLQ GNPLSCCGNG WLAAQLHQGR VDVDATQDLI 600
  601 CRFGSQEELS LSLVRPEDCE KGGLKNVNLI LLLSFTLVSA IVLTTLATIC FLRRQKLSQQ 660
  661 YKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle