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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNGA1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTNIINTWH SFVNIPNVIV PAIEKEIRRM ENGACSSFSD DDNGSLSEES ENEDSFFRSN  60
   61 SYKRRGPSQR EQHLPGTMAL FNVNNSSNKD QEPKEKKKKK KEKKSKADDK NENKKDPEKK 120
  121 KKKEKEKEKK KKEEKTKEKK EEEKKEVVVI DPSGNTYYNW LFCITLPVMY NWTMIIARAC 180
  181 FDELQSDYLE YWLIFDYVSD VVYLADMFVR TRTGYLEQGL LVKDRMKLIE KYKANLQFKL 240
  241 DVLSVIPTDL LYIKFGWNYP EIRLNRLLRI SRMFEFFQRT ETRTNYPNIF RISNLVMYIV 300
  301 IIIHWNACVY YSISKAIGFG NDTWVYPDVN DPEFGRLARK YVYSLYWSTL TLTTIGETPP 360
  361 PVLDSEYIFV VVDFLIGVLI FATIVGNIGS MISNMNAARA EFQSRVDAIK QYMNFRNVSK 420
  421 DMEKRVIKWF DYLWTNKKTV DEREVLRYLP DKLRAEIAIN VHLDTLKKVR IFADCEAGLL 480
  481 VELVLKLQPQ VYSPGDYICK KGDIGREMYI IKEGKLAVVA DDGITQFVVL SDGSYFGEIS 540
  541 ILNIKGSKAG NRRTANIKSI GYSDLFCLSK DDLMEALTEY PDAKTMLEEK GRQILMKDGL 600
  601 LDINIANMGS DPKDLEEKVT RMEGSVDLLQ TRFARILAEY ESMQQKLKQR LTKVEKFLKP 660
  661 LIETEFSALE EPGGESELTE SLQD

YRC Informatics Platform - Version 3.0
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