YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|139948989, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.87
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFLPARGSVG GAASAVSRGW PHTVQWRLVG FFLLLLLEGA RCLANPSNSP GINNNNRPNV  60
   61 NIFMSEEEVK KLLGLDAELY YVRDDVVNHY ALSFVLPVPS DTNSLHFTWH SSSKVDYRLG 120
  121 FHVENTSAMD QPQSNISVQG EVPRTRSVFR VDLFCSGKAD GEAVLTVQLN LSTAANFTVL 180
  181 NFKRRKMCYR RIEQPEPPKT LPFPNTTIQR IDASSPNAPT TSTRVFYISV CVCCIVIFLV 240
  241 AIILAVLHLH SMKRVEMDDS VSDSGSSQGL SQPSTQTTQY LRADTPNNAT PVTSYPSLRI 300
  301 EKNDLRSVTL LEAKAKVKDI AISRERVTLR DVLHEGTFGR IFHGVLLDEK DPSKEKQVFV 360
  361 KAVKDHASEV QVTMMLTESC KLRGLHHRNL LPISHVCIED GEKPMVLLPY MNWGNLKLFL 420
  421 RQCKLAEANN PQAISQQDLV HMAIQISCGM SYLARREVIH KDLAARNCVI DNSMQVKITD 480
  481 NALARDLFPM DYHCLGDNEN RPVRWMALES LLNNDFSSAS DVWAFGVTLW ELMTLGQTPY 540
  541 VDIDPFEMAA YLKDGYRIAQ PINCPDELFA VMACCWALDP EERPKFQQLV QCLTEFHAAL 600
  601 GAYV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle