YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	PX11A_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.69
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAFIRVANQ SQGRDRLFRA TQHACMLLRY LLESKADKEA VVLKLKRLET SVSTGRKWFR  60
   61 LGNVFHAIQA TEQSIQAADL APRLCLTLAN LNRVVYYICD TVLWAKSVGL TSGVNREKWQ 120
  121 RWAARHYYYF LLLSLVRDLY EILLQMGQVA RDRAKREKSS RDPPKYSVAN EETEWLQSFL 180
  181 LLLFQSLKRH PPLLLDTVKN FCDILIPLNQ LGIYKSNLGV VGLGGLISSL AGLLTVVYPQ 240
  241 LKLKAR

Type	Start	End	Confidence
Non-Cytoplasmic	1	217	0.72
Transmembrane Helix	218	238	0.89
Cytoplasmic	239	246	0.69