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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAT1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVAGAKRRA VATPATAAAE EERQAREKML EARRGDGADP EGEGVTLQRN ITLLNGVAII  60
   61 VGTIIGSGIF VTPTGVLKEA GSPGLSLVVW AVCGVFSIVG ALCYAELGTT ISKSGGDYAY 120
  121 MLEVYGSLPA FLKLWIELLI IRPSSQYIVA LVFATYLLKP VFPTCPVPEE AAKLVACLCV 180
  181 LLLTAVNCYS VKAATRVQDA FAAAKLLALA LIILLGFIQM GKDMGQGDAS NLQQKLSFEG 240
  241 TNLDVGNIVL ALYSGLFAYG GWNYLNFVTE EMINPYRNLP LAIIISLPIV TLVYVLTNLA 300
  301 YFTTLSTNQM LTSEAVAVDF GNYHLGVMSW IIPVFVGLSC FGSVNGSLFT SSRLFFVGSR 360
  361 EGHLPSVLSM IHPQLLTPVP SLVFTCIMTL MYAFSRDIFS IINFFSFFNW LCVALAIIGM 420
  421 MWLRFKKPEL ERPIKVNLAL PVFFILACLF LIAVSFWKTP MECGIGFAII LSGLPVYFFG 480
  481 VWWKNKPKWI LQAIFSVTVL CQKLMQVVPQ ET

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle