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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: APLP1_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.97
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPTSPAARG QGRRWRPPLP LLLPLSLLLL RAQLAVGNLA VGSPSAAEAP GSAQVAGLCG  60
   61 RLTLHRDLRT GRWEPDPQRS RRCLLDPQRV LEYCRQMYPE LHIARVEQAA QAIPMERWCG 120
  121 GTRSGRCAHP HHEVVPFHCL PGEFVSEALL VPEGCRFLHQ ERMDQCESST RRHQEAQEAC 180
  181 SSQGLILHGS GMLLPCGSDR FRGVEYVCCP PPATPNPSGM AAGDPSTRSW PLGGRAEGGE 240
  241 DEEEVESFPQ PVDDYFVEPP QAEEEEEEEE ERAPPPSSHT PVMVSRVTPT PRPTDGVDVY 300
  301 FGMPGEIGEH EGFLRAKMDL EERRMRQINE VMREWAMADS QSKNLPKADR QALNEHFQSI 360
  361 LQTLEEQVSG ERQRLVETHA TRVIALINDQ RRAALEGFLA ALQGDPPQAE RVLMALRRYL 420
  421 RAEQKEQRHT LRHYQHVAAV DPEKAQQMRF QVQTHLQVIE ERMNQSLGLL DQNPHLAQEL 480
  481 RPQIQELLLA EHLGPSELDA SVPGSSSEDK GSLQPPESKD DPPVTLPKGS TDQESSSSGR 540
  541 EKLTPLEQYE QKVNASAPRG FPFHSSDIQR DELAPSGTGV SREALSGLLI MGAGGGSLIV 600
  601 LSLLLLRKKK PYGTISHGVV EVDPMLTLEE QQLRELQRHG YENPTYRFLE ERP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle