YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|109732015, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKEIYLSLS LVLVFACGLL YQLTMRSQCF FACLPPFSFP QGLDGLLRSG RSIMFIETSE  60
   61 RVEPPPMVSC AVESAAKIYP EQPIIFFMKG LRDSVQLTSN TSYPAFSLLS AINNVFFVPL 120
  121 DMERLFKDTP LFSWYTKVNS STEKHWLHVS SDAARLAIIW KYGGIYMDTD VISLQPIPEE 180
  181 NFLAAQGSRH SSNGVFGFLP HHPFLWACME NFVEHYDSTI WGNQGPQLMT RMLRVWCRLK 240
  241 DFHGLGDLKC LNISFLHPQR FYPIPYPQWK RYYQVWDKEP SFNESYALHL WNYMNKEGKT 300
  301 VVRGSKTLVE NLYQKHCPKT YRVLIQGAEG TVSKKPGTGS R

Type	Start	End	Confidence
Signal Peptide	1	27	0.87
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	341	0.99