YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	T2R41_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLPTLSVFFM LTFVLLCFLG ILANGFIVLM LSREWLLRGR LLPSDMILFS LGTSRFFQQC  60
   61 VGLVNSFYYF LHLVEYSGSL ARQLISLHWD FLNSATFWFC TWLSVLFCIK IANFSHPAFL 120
  121 WLKWRFPALV PWFLLGSILV SVIVTLLFFW GNHTIYQAFL RRKFTGNTTF KEWNRRLEID 180
  181 YFMPLKVVTM SIPCSLFLVS ILLLISSLRR HSLRMQHNTH SLQDPNVQAH SRALKSLISF 240
  241 LVLYAVSFVS MIIDATVFIS SDNVWYWPWQ IILYFCMSVH PFILITNNLR FRGTFRQLLL 300
  301 LARGFWVA

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.88
Transmembrane Helix	8	31	0.92
Cytoplasmic	32	50	0.81
Transmembrane Helix	51	71	0.83
Non-Cytoplasmic	72	93	0.87
Transmembrane Helix	94	114	0.89
Cytoplasmic	115	128	0.86
Transmembrane Helix	129	150	0.95
Non-Cytoplasmic	151	186	0.94
Transmembrane Helix	187	206	0.95
Cytoplasmic	207	236	0.94
Transmembrane Helix	237	259	0.90
Non-Cytoplasmic	260	266	0.86
Transmembrane Helix	267	289	0.87
Cytoplasmic	290	308	0.95