YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	T2R16_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.79
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVPTQVTIFS IIMYVLESLV IIVQSCTTVA VLFREWMHFQ RLSPVETILI SLGISHFCLQ  60
   61 WTSMLYNFGT YSRPVLLFWK VSVVWEFMNI LTFWLTSWLA VLYCVKVSSF THPIFLWLRM 120
  121 KILKLVLWLI LGALIASCLS IIPSVVKYHI QMELVTLDNL PKNNSLILRL QQFEWYFSNP 180
  181 LKMIGFGIPF FVFLASIILL TVSLVQHWVQ MKHYSSSNSS LKAQFTVLKS LATFFTFFTS 240
  241 YFLTIVISFI GTVFDKKSWF WVCEAVIYGL VCIHFTSLMM SNPALKKALK LQFWSPEPS

Type	Start	End	Confidence
Non-Cytoplasmic	1	10	0.79
Transmembrane Helix	11	33	0.87
Cytoplasmic	34	44	0.81
Transmembrane Helix	45	65	0.86
Non-Cytoplasmic	66	86	0.82
Transmembrane Helix	87	105	0.88
Cytoplasmic	106	124	0.78
Transmembrane Helix	125	146	0.94
Non-Cytoplasmic	147	184	0.95
Transmembrane Helix	185	209	0.88
Cytoplasmic	210	229	0.88
Transmembrane Helix	230	251	0.91
Non-Cytoplasmic	252	259	0.79
Transmembrane Helix	260	280	0.89
Cytoplasmic	281	299	0.90