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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ATS19_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGPEMRLTRI CCCCCLLYQL GFLSHGTTSG LQLTPDLEEW EVVFPALWRR ESLNATGLSG  60
   61 GSSDPGSGRS SGGGGRGQAS GSSREVRSVA RAPQEEATRG QSEPWFGSPL EPGAEDEEEL 120
  121 ESQELPRGSS GDTALSSGTP ASWQPPLPPQ RPSSPPPAQQ EEPSAEEVLL RIPALSRDLY 180
  181 LLLRRDGRFL AQRFAVEQWP KPGPDPTRAT ADPGSSLLPD ASCFYTGTVL RHPGSLASFS 240
  241 TCGGGLMGFI QLNEDFLFIE PFNDTMAIIG HPHRLYRQKR STEEKVTENS AVHRHHCGVI 300
  301 SDKGRPRSKK IADNRREKRY SYKLSQEYNI ETVVVADPAM VSYHGADAAR RFILTILNMV 360
  361 FNLFQHKSLG VQVNLRVLKL ILLHETPADL YIGHHGEKML ESFCKWQHEE FGRRNDVHLE 420
  421 MSTSWGEDIA AVDAAILITR KDFCVHKDEP CDTVGIAYLN GMCSEKRKCI IAEDNGLNLA 480
  481 FTIAHEMGHN MGINHDNDHP SCADGLHIMS GEWIKGQNLG DVSWSRCSKE DLERFLRSKA 540
  541 SSCLLHTDPQ SLSSVLVPSK LPGMAYTADE QCQILFGPLA SFCQEMQHVI CTGLWCKVEG 600
  601 EAECRTKLDP PMDGTDCDPG KWCKAGECTR RTPAPEHLAG EWSPWSSCSR SCSSGVSSRE 660
  661 RKCPGLGSEA RDCNGPRKQY RICENPPCPA GLPGFRDWQC QAYSVRTSYP KHALQWQAVF 720
  721 DEEKPCALFC SPVGKEQPVL LSEKVMDGTS CGYQGLDICA NGRCQKAGCD GLLGSLARED 780
  781 HCGVCNGNGK SCKVIKGDFN HTRGAGYVEV LVIPAGARRI KVVEEKPAHS FLALRDASKQ 840
  841 SINSDWKIEH SGAFSLAGTT VHYLRRGLWE KISAKGPTTT PLHLLVLLFQ DQNYGLHYEY 900
  901 TVPSDPLPDN QSSKEPGPLF MWTHAGWGDC NATCGGGERK TMVSCTKIMS KNISLVDNKK 960
  961 CKDLTKPEPQ IRKCNEQPCQ TRWMMTEWTT CSRTCGKGVQ SRQVACTQQL ENGTLIRAWE1020
 1021 RDCLGPKPAT VQRCEGQDCM TVWEAGVWSE CSVKCGKGVR HRTVRCTNPR KKCVLSTRPR1080
 1081 EAEDCEDYSK CYVWRVGDWS KCSITCGKGM QSRVIQCMHK ITGRHGNECF SSEKPAAYRP1140
 1141 CHLQPCNEKI NVNTITSPRL AALTFKCLGD QWPVYCRVIR EKNLCQDMRW YQRCCETCRD1200
 1201 FYAQKLQQKS 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle