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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NOC2L_MOUSE
Protein type: Transmembrane
Type Confidence: 0.81
Topology Confidence: 0.66
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASRAPRRR LEDLSVDEFL ASGFESGSES ELEGAAEERR ARGAAWNRER RGARTSPGPA  60
   61 GRLRKGRASE HKDQLSRLKD RDPEFYKFLQ ENDRSLLDFS DSDSSAEEEE PFHSLPDTLE 120
  121 EASETEEDGG EDSDALPRGL RSKKNEPVPV TLAMVERWRQ GSRHHLTPRL FHEVVQAFRA 180
  181 AVATTQGEQE AAETCRFQVA DSAVFNALVT FCIRDLCGCL QKLLFGKTPK DSNRLLLPSS 240
  241 SPLWGKLRVD VKSYLSAVVQ LAACLAEATV SAAVLQHISS LVPYFLTFPK QCRMLLKRMV 300
  301 VLWSTGEESL RVLAFLVLIR VCRHKKEAFL GPILKQMYIM YVRNCKFTSP STLPLISFMQ 360
  361 RTLTEMLALD PSVSYQHAFL YIRQLAVHLR NAMTTGKKET HQSVYNWQYV HCLYLWCRVL 420
  421 STLGSSEILQ PLLYPLSQII IGCIKLLPTA RFYPLRMHCV RALTLLSQTI GTFIPVLPFI 480
  481 LEIFQQVDFN RRPGRMSSKP INFSVILKLS STNLQEKAYR DGLLEQLCDL ILEYLHSQAH 540
  541 SIAFPELVLP TVLQLKSFLR ECKVANYCRQ VRQLLEKVQE NARHIESLRQ SATFSVSDRT 600
  601 AVDAWEKQVR EEGTPLTRYY GHWKKLRDRE IQLEISGKER LEDLNFPEIK RRKVEDRKDE 660
  661 DRKELKDLFE LDSSEGEDST DFFERGVPRL PEAHQGLKED QEEEDKEEGD SDSEDGDTDT 720
  721 GVDLSELWQL AQGAQDELED LQLSEED

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle