YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SUCA_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.53
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSSSSGLAA ARLLSRTFLL QQNGIRHGSY TASRKHIYID KNTKIICQGF TGKQGTFHSQ  60
   61 QALEYGTKLV GGTTPGKGGQ KHLGLPVFNT VKEAKEKTGA TASVIYVPPP FAAAAINEAI 120
  121 DAEIPLVVCI TEGIPQQDMV RVKHRLTRQG TTRLIGPNCP GVINPGECKI GIMPGHIHKK 180
  181 GRIGIVSRSG TLTYEAVHQT TQVGLGQSLC IGIGGDPFNG TDFIDCLEVF LNDPATEGII 240
  241 LIGEIGGHAE ENAAAFLKEH NSGPKAKPVV SFIAGITAPP GRRMGHAGAI IAGGKGGAKE 300
  301 KISALQSAGV VVSMSPAQLG TTIYKEFEKR KML

Type	Start	End	Confidence
Signal Peptide	1	19	0.53
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	333	0.99