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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RRBP1_MOUSE
Protein type: Transmembrane
Type Confidence: 0.98
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIYDTQTLG VVVFGGFMVV SAIGIFLVST FSMKETSYEE ALANQRKEMA KTHHQKGEKK  60
   61 KKEKTVEKKG KTKKKEEKPN GKIPEHDLDP NVTIILKEPV RVSAVAVAPT SVHSSVGHTP 120
  121 IATVPAMPQE KLASSPKDRK KKEKKVAKVE PAVSSIVNSI QVLASKSAIL EATPKEVPMV 180
  181 AVPPVGSKAS SPATSSQGKK GQGAQNQAKK GEGAQNQGKK GEGAQNQAKK GEGAQNQAKK 240
  241 GEGAQNQGKK GEGAQNQAKK GEGGQNQAKK GEGAQNQGKK GEGAQNQGKK GEGAQNQAKK 300
  301 GEGAQNQAKK GEGAQNQGKK GEGAQNQSKK GEGAQNQAKK GEGGQNQAKK GEGAQNQAKK 360
  361 GEGAQNQAKK GEGVQNQAKK GVEGAQNQGK KGEANQNQAK KGEGGQNQTK KGEGPQNQGK 420
  421 KGEAAQKQDK KIEGAQNQGK KPEGTSNQGK KGEGAQNQGK KGEGAQNQSK KGEGAQNQAK 480
  481 KGEGGQNQAK KGEGAQNQAK KGEGAQNQAK KGEGVQNQAK KGVEGAQNQG KKGEANQNQA 540
  541 KKGEGGQNQT KKGEGPQNQG KKGEAAQKQD KKIEGAQNQG KKPEGTSNQG KKGEGAQNQG 600
  601 KKGEGAQNQG KKGEGAQNQG KKGEGAQNQG KKGEGAQNQG KKGEGAQNQG KKGEGAQNQG 660
  661 KKGEGPQNQA KKGEGAQNQG KKGEGAQNQG KKGEGAQNQG KKAEGVQSQS KKGEGTQNQG 720
  721 KKGDGNPNQG KKGEGASNQN RKTDTVANQG TKQEGVSNQV KKSEGSPNQG KKAEGAPNQG 780
  781 KKKDGSPSQA KKVDAAANQG KKSEMAPAQG QKASMVQSQE APKQDAPAKK KSGSRKKGEP 840
  841 GPPDCDGPLF LPYKTLVSTV GSMVFSEGEA QRLIEILSEK TGVIQDTWHK ATQKGDPVAI 900
  901 LKRQLQEKEK LLATEQEDAA VAKSKLRELN KEMASEKAKA AAGEAKVKKQ LVAREQEIAA 960
  961 VQARMQASYR DHVKEVQQLQ GKIRTLQEQL ENGPNTQLAR LQQENSILRD ALNQATSQVE1020
 1021 SKQNTELAKL RQELSKVNKE LVEKSEASRQ EEQQRKALEA KAATFEKQVL QLQASHKESE1080
 1081 EALQKRLEEV TRELCRAQTS HANLRADAEK AQEQQQRVAE LHSKLQSSEV EVKSKCEELS1140
 1141 SLHGQLKEAR AENSQLTERI RSIEALLEAG QAQDTQASHA EANQQQTRLK ELESQVSCLE1200
 1201 KETSELKEAM EQQKGKNNDL REKNWKAMEA LALAERACEE KLRSLTQAKE ESEKQLHLAE1260
 1261 AQTKETLLAL LPGLSISAHQ NYAEWLQEFK EKGSELLKKP PTLEPSMDIV LKLREAEETQ1320
 1321 NSLQAECDQY RTILAETEGM LKDLQKSVEE EERVWKAKVG AAEEELHKSR VTVKHLEDIV1380
 1381 EKLKGELESS DQVREHTSHL EAELEKHMAA ASAECQNYAK EVAGLRQLLL ESQSQLDEAK1440
 1441 SEAQKQSDEL ALVRQQLSDM RSHVEDGDVA GSPAVPPAEQ DPMKLKTQLE RTEATLEAEQ1500
 1501 TRRQKLTAEF EEAQRTACRI QEELEKLRAA GPLESSGKEE ITQLKERLEK EKRLTSDLGR1560
 1561 AAIKLQELLK TTQEQLTKEK DTVKKLQEQL GKAEDGSSSK EGTSV

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