YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FOXL2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.60
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMASYPEPED TAGTLLAPES GRAVKEAEAS PPSPGKGGGT TPEKPDPAQK PPYSYVALIA  60
   61 MAIRESAEKR LTLSGIYQYI IAKFPFYEKN KKGWQNSIRH NLSLNECFIK VPREGGGERK 120
  121 GNYWTLDPAC EDMFEKGNYR RRRRMKRPFR PPPAHFQPGK GLFGSGGAAG GCGVPGAGAD 180
  181 GYGYLAPPKY LQSGFLNNSW PLPQPPSPMP YASCQMAAAA AAAAAAAAAA GPGSPGAAAV 240
  241 VKGLAGPAAS YGPYSRVQSM ALPPGVVNSY NGLGGPPAAP PPPPPPPHPH PHPHAHHLHA 300
  301 AAAPPPAPPH HGAAAPPPGQ LSPASPATAA PPAPAPTSAP GLQFACARQP ELAMMHCSYW 360
  361 DHDSKTGALH SRLDL

Type	Start	End	Confidence
Cytoplasmic	1	158	0.55
Transmembrane Helix	159	177	0.47
Non-Cytoplasmic	178	216	0.85
Transmembrane Helix	217	233	0.52
Cytoplasmic	234	375	0.51