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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SM3F_MOUSE, SEM3...
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVTAFILWA SLLTGAWPAT PIQDQLPATP RVRLSFKELK ATGTAHFFNF LLNTTDYRIL  60
   61 LKDEDHDRMY VGSKDYVLSL DLHDINREPL IIHWAASPQR IEECILSGKD GNGECGNFVR 120
  121 LIQPWNRTHL YVCGTGAYNP MCTYVNRGRR AQALPWTQMQ VVRGRGSRAT DGADRPTPTA 180
  181 PRQDYIFYLE PEKLESGKGK CPYDPKLDTA SALINEELYA GVYIDFMGTD AAIFRTLGKQ 240
  241 TAMRTDQYNS RWLNDPSFIH AELIPDSAER NDDKLYFFFR ERSAEAPQNP AVYARIGRIC 300
  301 LNDDGGHCCL VNKWSTFLKA RLVCSVPGED GIETHFDELQ DVFVQQTQDI RNPVIYAVFT 360
  361 SSGSVFRGSA VCVYSMADIR MVFNGPFAHK EGPNYQWMPF SGKMPYPRPG TCPGGTFTPS 420
  421 MKSTKDYPDE VINFMRTHPL MYQAVYPLQR RPLVVRTGAP YRLTTVAVDQ VDAADGRYEV 480
  481 LFLGTDRGTV QKVIVLPKDD QEVEELMLEE VEVFKEPAPV KTMTISSKRQ QLYVASAVGV 540
  541 THLSLHRCQA YGAACADCCL ARDPYCAWDG QACSRYTASS KRRSRRQDVR HGNPIRQCRG 600
  601 FNSNANKNAV ESVQYGVAGS AAFLECQPRS PQATVKWLFQ RDPSDRRREI RAEDRFLRTE 660
  661 QGLLLRALQL GDRGLYSCTA TENNFKHIVT RVQLHVLGRD AVHAALFPPL AVSVPPPPGT 720
  721 GPPTPPYQEL AQLLAQPEVG LIHQYCQGYW RHVPPSPREA PGALRPPELQ DQKKPRNRRH 780
  781 HPPDT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle