YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12832275
Protein type:	Globular with Signal Peptide
Type Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSASRRALQ LLSSANPVRG MGDSASKVIS AEEALPGRTE PIPVTAKHHV SGNRTVEPFP  60
   61 EGTQMAVFGM GCFWGAERKF WVLKGVYSTQ VGFAGGHTRN PTYKEVCSEK TGHAEVVRVV 120
  121 YRPEHISFEE LLKVFWENHD PTQGMRQGND FGTQYRSAVY PTSAVQMEAA LRSKEEYQKV 180
  181 LSKHNFVPIT TDIREGQVFY YAEDYHQQYL SKNPDGYCGL GGTGVSCPMA IKK

Type	Start	End	Confidence
Signal Peptide	1	20	0.94
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	233	0.99