YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DHH_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPASLLPL CCLALLALSA QSCGPGRGPV GRRRYVRKQL VPLLYKQFVP SMPERTLGAS  60
   61 GPAEGRVTRG SERFRDLVPN YNPDIIFKDE ENSGADRLMT ERCKERVNAL AIAVMNMWPG 120
  121 VRLRVTEGWD EDGHHAQDSL HYEGRALDIT TSDRDRNKYG LLARLAVEAG FDWVYYESRN 180
  181 HIHVSVKADN SLAVRAGGCF PGNATVRLRS GERKGLRELH RGDWVLAADA AGRVVPTPVL 240
  241 LFLDRDLQRR ASFVAVETER PPRKLLLTPW HLVFAARGPA PAPGDFAPVF ARRLRAGDSV 300
  301 LAPGGDALQP ARVARVAREE AVGVFAPLTA HGTLLVNDVL ASCYAVLESH QWAHRAFAPL 360
  361 RLLHALGALL PGGAVQPTGM HWYSRLLYRL AEELMG

Type	Start	End	Confidence
Signal Peptide	1	22	0.98
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	396	0.95