YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|1220404, gi\|6...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAETMESPS LFLCKGLLLT AFLLTCWNAP AAAELTIELV PPMVAEGGNS VLFVHEMPLN  60
   61 VQAFYWYKQR DSTKSYEVAR YLTPTNQSSK MPQHSDRKTV FYSGSLLIRN VTKADSGVYT 120
  121 LLTFNTEMES ELTHVHLEVQ EPVAQPTLQA DSTAVTEAGS VTLTCVSEDP GLSIRWLFNH 180
  181 QGLYFNDRMT LSQKNSRLTI DPAKREDAGE YQCEVSNGYS SKMSLPLQMS VTSE

Type	Start	End	Confidence
Signal Peptide	1	33	0.97
N-region	1	24
H-region	25	30
C-region	31	33
Cleavage Site	33	34
Non-Cytoplasmic	34	234	0.99