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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: KCNH8_MOUSE
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPVMKGLLAP QNTFLDTIAT RFDGTHSNFI LANAQVAKGF PIVYCSDGFC ELAGFARTEV  60
   61 MQKSCSCKFL FGVETNEQLM LQIEKSLEEK VEFKGEIMFY KKNGAPFWCL LDIVPIKNEK 120
  121 GDVVLFLASF KDITDTKVKI TSEDKKEDRT KGRSRAGSHF DSARRRSRAV LYHISGHLQR 180
  181 REKNKLKINN NVFVDKPAFP EYKASDAKKS KFILLHFSTF KAGWDWLILL ATFYVAVTVP 240
  241 YNVCFIGNED LSTTRSTTVS DIAVEILFII DIILNFRTTY VSKSGQVIFE ARSICIHYVT 300
  301 TWFIIDLIAA LPFDLLYAFN VTVVSLVHLL KTVRLLRLLR LLQKLDRYSQ HSTIVLTLLM 360
  361 SMFALLAHWM ACIWYVIGKM EREDNSLLKW EVGWLHELGK RLESPYYGNN TLGGPSIRSA 420
  421 YIAALYFTLS SLTSVGFGNV SANTDAEKIF SICTMLIGAL MHALVFGNVT AIIQRMYSRW 480
  481 SLYHTRTKDL KDFIRVHHLP QQLKQRMLEY FQTTWSVNNG IDSNELLKDF PDELRSDITM 540
  541 HLNKEILQLS LFECASRGCL RSLSLHIKTS FCAPGEYLLR QGDALQAIYF VCSGSMEVLK 600
  601 DSMVLAILGK GDLIGANLSI KDQVIKTNAD VKALTYCDLQ CIILKGLFEV LGLYPEYAHK 660
  661 FVEDIQHDLT YNLREGHESD VISRLSNKST VSQAEPKGNG SINKRLPSIV EDEEEEEVEE 720
  721 EETTSLSPIY TRGSSVSHSK KTGSNKTYLG LSLKQLASGT VPFHSPIRVS SANSPKTKQE 780
  781 ADPPNHGRKK EKNLKVQLSS LGSAGTPELS PRIVDGIEDG NSNEETQTFD FGSEQIRPEP 840
  841 RISPPLAESE IGAAFLFIKA EETKQQINKL NSEVTTLTQE VSQLGRDMRS IMQLLENILS 900
  901 PQQPSQFCSL HPTPMCPSRE SLQTRVSWSA HQPCLHLQAG GAHLYHGNVA SGIWSVDPSL 960
  961 VGSSPQRTEA HEQNPADSEL HHSPNLDYSP SHCQVIQEGH LQFLRCISPH SDTTLTPLQS1020
 1021 ISATLSSSVC SSSETSLHLV LPSRSEEGSI THGPVSSFSL ENLPGSWDRE QMMSASSERL1080
 1081 ENFPVEVVTS TADVKDSKAI NV

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