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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NU155_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSVLGSMMV ASTSAAASLQ EALENAGRLI DRQLQEDRMY PDLSELLMVS APNSPTVSGM  60
   61 SDMDYPLQGP GLLSVPSLPE ISTIRRVPLP PELVEQFGHM QCNCMMGVFP PISRAWLTID 120
  121 SDIFMWNYED GGDLAYFDGL SETILAVGLV KPKAGIFQPH VRHLLVLATP VDIVILGLSY 180
  181 ANVQTGSGIL NDSMCGGMQL LPDPLYSLPT DNTYLLTITS TDNGRIFLAG KDGCLYEVAY 240
  241 QAEAGWFSQR CRKINHSKSS LSFLVPSLLQ FTFSEDDPIV QIEIDNSRNI LYTRSEKGVI 300
  301 QVYDLGHDGQ GMSRVASVSQ NAIVSAAGNI ARTIDRSVFK PIVQIAVIES SESLDCQLLA 360
  361 VTHAGVRLYF STCPFRQPLA RPNTLTLVHV RLPPGFSASS TVEKPSKVHK ALYSKGILLM 420
  421 TASENEDNDI LWCVNHDTFP FQKPMMETQM TTRVDGHSWA LSAIDELKVD KIITPLNKDH 480
  481 IPITDSPVVV QQHMLPPKKF VLLSAQGSLM FHKLRPVDQL RHLLVSNVGG DGEEIERFFK 540
  541 LHQEDQACAT CLILACSTAA CDREVSAWAT RAFFRYGGEA QMRFPATLPT PSNVGPILGS 600
  601 PMYSSSPVPS GSPYPNPSSL GTPSHGAQPP TMSTPMCAVG SPAMQAASMS GLTGPEIVYS 660
  661 GKHNGICIYF SRIMGNIWDA SLVVERVFKS SNREITAIES SVPVQLLESV LQELKGLQEF 720
  721 LDRNSQFSGG PLGNPNTTAR VQQRLVGFMR PENGNTQQMQ QELQRKFQEA QLSEKISLQA 780
  781 IQQLVRKSYQ ALALWKLLCE HQFSVIVGEL QKEFQEQLKI TTFKDLVIRD KEVTGALIAS 840
  841 LINCYIRDNA AVDGISLHLQ DTCPLLYSTD DAVCSKANEL LQRSRQVQSK TERERMLRES 900
  901 LKEYQKISNQ VDLPSVCAQY RQVRFYEGVV ELSLTAAEKK DPQGLGLHFY KHGEPEEDVV 960
  961 GLQTFQERLN SYKCITDTLQ ELVNQSKAAP QSPSVPKKPG PPVLSSDPNM LSNEEAGHHF1020
 1021 EQMLKLAQRS KDELFSIALY NWLIQADLAD KLLQIASPFL EPHLVRMARV DQNRVRYMDL1080
 1081 LWRYYEKNRS FSSAARVLSK LADMHSTEIS LQQRLEYIAR AILSAKSSTA ISSIAADGEF1140
 1141 LHELEEKMEV ARIQLQIQET LQRQYSHHSS VQDAISQLDS ELMDITKLYG EFADPFKLAE1200
 1201 CKLAVIHCAG YSDPILVHTL WQDIIEKELN DSVALSSSDR MHALSLKLVL LGKIYAGTPR1260
 1261 FFPLDFIVQF LEQQVCTLNW DVGFVIQTMN EIGVPLPRLL EVYDQLFKSR DPFWNRVKSP1320
 1321 LHLLDCIHVL LTRYVENPSL VLNCERRRFT NLCLDAVCGY LVELQSMSSS VAVQAITGNF1380
 1381 KSLQAKLERL H

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle