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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|12835938
Protein type: Globular with Signal Peptide
Type Confidence: 0.80
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAVAAGT GSPAGTESAE GGPGAAAALE LWLNKATDPS MAEQDWSAIQ KFCEQVNTDP  60
   61 SGPTHAPWLL AHKIQSPQEK EALYALTVLE ICMNHCGEKF HSEVAKFRFL NELIKVLSPK 120
  121 YLGAWATEKV KGRVIEILFS WTVWFPEDIK IRDAYQMLKK QGIIKQDPKL PMDKILPPPS 180
  181 PWPKSIFDAD EEKSKLLTRL LKSNHPEDLQ AANRLIKNLV KEEQEKSGKV SRRVSAVEEV 240
  241 RSHVRVLREM LSMYRRPGHA LPDQQALQVV YERCEKLRPT LFRLASDTTD DDDALAEILQ 300
  301 ANDLLTQGVR LYKQVVEGRV SAGNAVPAAV GAIPAPRAFP NPEPCGLNCP LIDLETPSLL 360
  361 HQDLAALGIN DVPTRNQVVI PSCCNDKKQP GAITLMGGGI QSLSADRNLL DLFSPQPSPG 420
  421 LNYVPQKSIP KEVPPGTKAS PGWSWEAGPL ASSTASQNTP LAHVFVPLES VKPSSLPPIV 480
  481 VYDRNGFRIL LHFSQTGAAG HPDVKVLLLT MMSTATQPVW DVMFQVAVPK SMRVKLQPAS 540
  541 SSKLPAFSPL MPPAVISQTL LLDNPHKEPI RLRYKLTFNQ GGQPFSEVGE VKDFPDLAVL 600
  601 STA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle