YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	BAP29_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTIQWAAVAS FLYAEIGLIL LFCLPFIPPQ RWQKIFSFSV WGKIASFWNK AFLTIIILLI  60
   61 ILFLDAVREV RKYSSTNVVE KNSAIRPSAF EHTQMKLFRS QRNLYISGFS LFFWLVLRRL 120
  121 VTLITQLAKE IANKGVLKIQ AENTNKAAKK FMEENEKLKL GLRNDNAEEH LLEAENKKLI 180
  181 ESKENLKTEL KKASDALLKA QNDVMTMKIQ SERLSKEYDR LLKEHSELQN RLEKEKKKGL 240
  241

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	28	0.91
Non-Cytoplasmic	29	45	0.62
Transmembrane Helix	46	67	0.89
Cytoplasmic	68	102	0.67
Transmembrane Helix	103	121	0.66
Non-Cytoplasmic	122	240	0.69