YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX11_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLWCPGWR LVASCGRGWR QPGWSGRTVV NAELVLRPGW DGLGGAERGL RRLGTWKRPC  60
   61 GVRGPATQPP RRPRSSNPFQ RAQEDEWRRR NKTVLTYVAA AAVGMLGASY AAVPLYRLYC 120
  121 QTTGLGGSAV AGHSSDQIEN MVPVKDRVIK VTFNADVHAS LQWNFRPQQT EIYVVPGETA 180
  181 LAFYKAKNPT DKPVIGISTY NVVPFEAGQY FNKIQCFCFE EQRLNPQEEV DMPVFFYIDP 240
  241 EFAEDPRMVN VDLITLSYTF FEAKEGHKLP VPGYN

Type	Start	End	Confidence
Cytoplasmic	1	93	0.86
Transmembrane Helix	94	113	0.84
Non-Cytoplasmic	114	275	0.97