YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ALG5_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.77
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATLLLQLLG LGVALAAAAL ILVSIVAFIT ATKMPPCYQH EEEKFFLNAK GQKEALPSIW  60
   61 DSPTKQLSVV VPSYNEEKRL PVMMDEALNY LEKRQKHDCT FTYEVIVVDD GSEDQTSKVA 120
  121 LKYCQKYGSD KVRVITLVRN RGKGGAVRMG VFSSRGEKIL MADADGATKF PDVEKLEKGL 180
  181 SDLQPWPEQM AIACGSRAHL EKESIAQRSY FRTFLMYGFH FLVWFLCVKG IRDTQCGFKL 240
  241 LTREAAARTF SSLHIERWAF DVELLYIAQC LQIPIAEVAV NWTEIEGSKL VPFWSWLQMG 300
  301 KDLLFIRLRY LTGAWRLKQT RKAS

Type	Start	End	Confidence
Signal Peptide	1	27	0.88
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	324	0.91