YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLF2A_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPIKFPFR PRGGQPREDT TPKRGLRRYL LELKESNKEF WLSGHAVFKL LSLGCMISAL  60
   61 DYFETMLPHP VLILLICMEA AICIFFIFLN TLAINRYIPF VFWPMADIFN SLFSCVFLGG 120
  121 GIYFAFKARR LLPKPYLTAM ILMGAAAICS FIDMLLQFQH FRGLRLRKW

Type	Start	End	Confidence
Cytoplasmic	1	40	0.88
Transmembrane Helix	41	63	0.75
Non-Cytoplasmic	64	70	0.63
Transmembrane Helix	71	92	0.93
Cytoplasmic	93	102	0.64
Transmembrane Helix	103	126	0.86
Non-Cytoplasmic	127	135	0.70
Transmembrane Helix	136	158	0.90
Cytoplasmic	159	169	0.74