YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FACE2_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAALGGDGLR LLSVSRPERQ PESAALSGPG SGLCCWVSVF SCFSLACSYV GSLYVWKSEL  60
   61 PRDHPAVIKR RSTSVLVVSS LSPLCVLLWR ELTGIQPGTS LLTLMGFRLE GIFPAALLPL 120
  121 LLTMILFLGP LMQLSMDCPC DLTDGLKVVL APRSWARCLT DMRWLRNQVI APLTEELVFR 180
  181 ACMLPMLAPC TGLGPAVFTC PLFFGVAHFH HIIEQLRFRQ SSVGSIFVSA AFQFSYTAVF 240
  241 GAYTAFLFIR TGHLIGPVLC HSFCNYMGFP AVCAALEHPQ KWPLLAGYAL GVGLFLLLLQ 300
  301 PLTDPKLYGS LPLCMLLERT GASETLLCS

Type	Start	End	Confidence
Non-Cytoplasmic	1	32	0.59
Transmembrane Helix	33	56	0.83
Cytoplasmic	57	71	0.62
Transmembrane Helix	72	93	0.78
Non-Cytoplasmic	94	110	0.53
Transmembrane Helix	111	131	0.88
Cytoplasmic	132	186	0.55
Transmembrane Helix	187	212	0.77
Non-Cytoplasmic	213	222	0.47
Transmembrane Helix	223	247	0.83
Cytoplasmic	248	253	0.35
Transmembrane Helix	254	276	0.75
Non-Cytoplasmic	277	283	0.37
Transmembrane Helix	284	303	0.90
Cytoplasmic	304	329	0.46