YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CLF2B_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAPAPRART GGKKKDERRG FKGYKWEFRD SNKDFWAQGH AECKSLIMIL LIAAMVCFQR  60
   61 VATHPIVILL LTMELSICAF FFFLYSLAIN RYIPFVFWPM MDLMNDLACS TFLIGGIFFA 120
  121 LEARRELPVP YLTGMILMGV TAFISIIDLC LQRRQFKSRK LRKFILLTPD RKGKKQDPKL 180
  181 LLMLAAKEDE EERQRELAEK AKRESMDPGW

Type	Start	End	Confidence
Cytoplasmic	1	42	0.90
Transmembrane Helix	43	62	0.84
Non-Cytoplasmic	63	67	0.61
Transmembrane Helix	68	89	0.89
Cytoplasmic	90	102	0.69
Transmembrane Helix	103	121	0.94
Non-Cytoplasmic	122	130	0.70
Transmembrane Helix	131	151	0.96
Cytoplasmic	152	210	0.91