YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|12838858
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVIGMARLV LGLVSCTFFL AVSGLYSSSD DVIELTPSNF NREVIQSDGL WLVEFYAPWC  60
   61 GHCQRLTPEW KKAATALKDV VKVGAVNADK HQSLGGQYGV QGFPTIKIFG ANKNKPEDYQ 120
  121 GGRTGEAIVD AALSALRQLV KDRLGGRSGG YSSGKQGRGD SSSKKDVVEL TDDTFDKNVL 180
  181 DSEDVWMVEF YAPWCGHCKN LEPEWAAAAT EVKEQTKGKV KLAAVDATMN QVLASRYGIK 240
  241 GFPTIKIFQK GESPVDYDGG RTRSDIVSRA LDLFSDNAPP PELLEIINED IAKKTCEEHQ 300
  301 LCVVAVLPHI LDTGAAGRNS YLEVLLKLAD KYKKKMWGWL WTEAGAQYEL ENALGIGGFG 360
  361 YPAMAAINAR KMKFALLKGS FSEQGINEFL R

Type	Start	End	Confidence
Signal Peptide	1	27	0.93
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	391	0.99