YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|148672776, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.68
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSLKNVLYF QAGLGVLANM FLLCFYIYII LGHRPKPTDL TSCQLTFVHI MMLLTGGDIL  60
   61 LTDLLASLNT ENDFKCKATF YINRMMRGLS ISATCLLSVF QAVTISPNTS LLANFKQKVK 120
  121 KYMISALFCI WFFNFSVSTD IIFYVGGFTN VSENKQIMVT KSCSLLPLNY IIRGLILTMT 180
  181 ILRDVFLVGV MLTTSVYMVI FLFRHQRQCK HLHSISHLRA SPEKRATQTI VLLVVFFVVM 240
  241 YWVDFIISST SVLLWMYDPV LLTAQKFVVN AYPTITPLVQ ISSDNRIINR LKNLQSQ

Type	Start	End	Confidence
Non-Cytoplasmic	1	7	0.68
Transmembrane Helix	8	30	0.93
Cytoplasmic	31	42	0.59
Transmembrane Helix	43	62	0.81
Non-Cytoplasmic	63	87	0.68
Transmembrane Helix	88	111	0.80
Cytoplasmic	112	121	0.71
Transmembrane Helix	122	144	0.87
Non-Cytoplasmic	145	184	0.74
Transmembrane Helix	185	205	0.92
Cytoplasmic	206	225	0.96
Transmembrane Helix	226	246	0.92
Non-Cytoplasmic	247	297	0.78