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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: STS_MOUSE
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.80
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRPRPLLLA VMAATLADII LAADPAPAGP APRPPNFLLI MADDLGIGDL GCYGNKTLRT  60
   61 PHLDRLAREG VKLTQHLAAA PLCTPSRAAF LTGRYPPRSG MAAHGRVGVY LFTASSGGLP 120
  121 PSEVTMARLL KGRGYATALI GKWHLGLSCR GATDFCHHPL RHGFDRFLGV PTTNLRDCRP 180
  181 GAGTVFGPAL RVFAAGPLAA LGASLAAMAA ARWAGLARVP GWALAGTAAA MLAVGGPRSA 240
  241 SCLGFRPANC FLMDDLAVAQ RPTDYGGLTR RLADEAALFL RRNRARPFLL FLSFLHVHTA 300
  301 HFADPGFAGR SLHGAYGDSV EEMDWGVGRV LAALDELGLA RETLVYFTSD HGAHVEELGP 360
  361 RGERMGGSNG VFRGGKGNNW EGGVRVPCLV RWPRELSPGR VVAEPTSLMD VFPTVARLAG 420
  421 AELPGDRVID GRDLMPLLRG DAQRSEHEFL FHYCNAYLQA VRWHNGSAVW KAFYFTPNFA 480
  481 PAGANGCFST HVCLCAGPAH VTAHDPPLLF DLTRDPGERR PLTPEAEPRH REVLDAIDAA 540
  541 ARAHRARLRP APDQLAPRHL MWKPWLQLWG GGGAGGGAGA QDDSGHAHGD GSHAHDDPGH 600
  601 AQDRGDDDAH YGGHATTRTQ ATPR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle