YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	A4GAT_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.92
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISCSHLEE TMSKPPDCLL RMLRGTPRQR VFTFFIISFK FMFLISILIY WHTVGAPKDQ  60
   61 REYSLPVDFS CPQLAFPRVS APGNIFFLET SDRTSPNFLF MCSVESAARA HPESQVVVLM 120
  121 KGLPRDTTAQ PRNLGISLLS CFPNVWIRPL DLQELFEDTP LAAWYSEARH RWEPYQLPVL 180
  181 SDASRIALLW KFGGIYLDTD FIVLKNLLNL TNTLGIQSRY VLNGAFLAFE RKHEFLALCL 240
  241 HDFVANYNGW IWGHQGPQLL TRVFKKWCSI QSLEKSHACR GVTALPPEAF YPIPWQNWKK 300
  301 YFEDISPEEL TQLLNATYAV HVWNKKSQGT HLEATSKALL AQLHARYCPT THRAMKMYL

Type	Start	End	Confidence
Cytoplasmic	1	30	0.98
Transmembrane Helix	31	54	0.92
Non-Cytoplasmic	55	359	0.98