YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|13879276, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPDLLLLGLI GALTLLLLLT LLAFAGYSGL LTGVTVSAGS PPIRNITVAY KFHVGSYGDT  60
   61 GHLFTESCSI SPKLRSIAVY YDNPHTVPPE KCRCAVGSIL SEGEESPSPE LIHLYQKFGF 120
  121 KIFSFPAPSH VVIATFPYTT PISIWLAARR VHPALDTYIK ERKLCAHPRL EIYQQDKIHF 180
  181 MCPLARQGDF YVPEVKETER KCRELAEATD TQTDGTGADT SDASSVSLDV RPGSRETSAT 240
  241 TLSPGAGNRG WDDGDNRSEH SYSESGASGS SFEELDLEGE GPLGEPRLNP EAKLLGPPRE 300
  301 LSTPERGEE

Type	Start	End	Confidence
Signal Peptide	1	25	0.99
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	309	0.98