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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: LAMC2_MOUSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPALWLSCCL GVALLLPAAQ ATSRREVCDC NGKSRQCVFD QELHRQTGSG FRCLNCNDNT  60
   61 AGVHCERCRE GFYRHRDRDR CLPCNCHSKG SLSAGCDNSG QCRCKPGVTG QRCDRCQPGF 120
  121 HMLTDAGCTR DQGQLDSKCD CDPAGISGPC DSGRCVCKPA VTGERCDRCR PGYYHLDRAN 180
  181 PEGCTQCFCY GHSASCHASA DFSVHKITST FSQDVDGWKA VQRNGAPAKL HWSQRHRDVF 240
  241 SSARRSDPVY FVAPAKFLGN QQVSYGQSLS FDYRVDRGGR QPSAYDVILE GAGLQIRAPL 300
  301 MAPGKTLPCG ITKTYTFRLN EHPSSHWSPQ LSYFEYRRLL RNLTALLIRA TYGEYSTGYI 360
  361 DNVTLVSARP VSGAPAPWVE RCVCPAGYKG QFCQECASGY KRDSARLGPF GACVPCNCQG 420
  421 GGACDPDTGD CYSGDENPDI ECADCPIGFY NDPHDPRSCK PCPCHNGFSC SVMPETEEVV 480
  481 CNNCPPGVTG ARCELCADGF FGDPFGERGP VRPCQRCQCN NNVDPNASGN CDQLTGRCLK 540
  541 CIYNTAGVYC DQCKAGYFGD PLAPNPADKC RACNCSPMGS EPGECRGDGS CVCKPGFGGL 600
  601 NCDHAALTSC PACYNQVKIQ MDQFTQQLQS LEALVSKAQG GGGGGTVPVQ LEGRIEQAEQ 660
  661 ALQDILGEAQ ISEGAMRAVA VRLAKARSQE NDYKTRLDDL KMTAERIRAL GSQHQNRVQD 720
  721 TSRLISQMRL SLAGSEALLE NTNIHSSEHY VGPNDFKSLA QEATRKADSH AESANAMKQL 780
  781 ARETEDYSKQ ALSLARKLLS GGGGSGSWDS SVVQGLMGKL EKTKSLSQQL SLEGTQADIE 840
  841 ADRSYQHSLR LLDSASQLQG VSDLSFQVEA KRIRQKADSL SNLVTRQTDA FTRVRNNLGN 900
  901 WEKETRQLLQ TGKDRRQTSD QLLSRANLAK NRAQEALSMG NATFYEVENI LKNLREFDLQ 960
  961 VEDRKAEAEE AMKRLSSISQ KVADASDKTQ QAETALGSAT ADTQRAKNAA REALEISSEI1020
 1021 ELEIGSLNLE ANVTADGALA MEKGTATLKS EMREMIELAR KELEFDTDKD TVQLVITEAQ1080
 1081 QADARATSAG VTIQDTLNTL DGILHLIDQP GSVDEEGMML LEQGLFQAKT QINSRLRPLM1140
 1141 SDLEERVRRQ RNHLHLLETS IDGILADVKN LENIRDNLPP GCYNTQALEQ Q

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle