YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|74201410, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.51
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEARLMARD VIKTVPHDQV PQPPVASETP SMKEPVAGEN LSPVRDVDLM ECVEGRNQVA  60
   61 LRLACIGDEM DLCLRSPRLV QLPGIAIHRL AVTYSRTGVR GIFRSLIRSL TNLRENIWSW 120
  121 RVLTPGAWVS PDQDPGQLFP MVLLVFLLLG GAWYLQLQ

Type	Start	End	Confidence
Cytoplasmic	1	135	0.66
Transmembrane Helix	136	157	0.87
Non-Cytoplasmic	158	158	0.51