YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NMNA3_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNRIPVVLL ACGSFNPITN MHLRLFEVAR DHLHQTGRYQ VIEGIISPVN DSYGKKDLVA  60
   61 SHHRVAMARL ALQTSDWIRV DPWESEQAQW METVKVLRHH HRELLRSSAQ MDGPDPSKTP 120
  121 SASAALPELK LLCGADVLKT FQTPNLWKDT HIQEIVEKFG LVCVSRSGHD PERYISDSPI 180
  181 LQQFQHNIHL AREPVLNEIS ATYVRKALGQ GQSVKYLLPE AVITYIRDQG LYINDGSWKG 240
  241 KGKTG

Type	Start	End	Confidence
Signal Peptide	1	21	0.61
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	245	0.99