YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|23274124
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 TRPEKDKGKS ESGKEDDKKS KKESVKEEKT KKEKEKKKDG EKEDSKKEET PGTPKKKETK  60
   61 KKFKLEPHDD QVFLDGNEVF VWIYDPVHIK TFVMGLILVI AVIAATLFPL WPAEMRVGVY 120
  121 YLSVGAGCFV ASILLLAIAR CILFLIIWLI TGGRHHFWFL PNLTADVGFI DSFRPLYTHE 180
  181 YKGPKADLKK DEKSETKKQQ KSDSEEKSDS EKKEDEEGKG APADHGPEGS GGERHSDTDS 240
  241 DRREDDRSQH SSGNGNDFEM ITKEELEQQT DGDCDEEDDD KDGEVPKSAH EKS

Type	Start	End	Confidence
Cytoplasmic	1	90	0.94
Transmembrane Helix	91	111	0.93
Non-Cytoplasmic	112	121	0.75
Transmembrane Helix	122	150	0.83
Cytoplasmic	151	293	0.91