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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|148676201, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGCPPTAELL RNGGCDWLAG IFRVGERVRY HGRLNLQGLL LEMLFLAFHA GSWGSWCCCC  60
   61 CVITADRPWD RGRRWQLEMA DTPSVYETRF EAAVKVIQSL PKNGSFQPTN EMMLKFYSFY 120
  121 KQATEGPCKL SRPGFWDPIG RYKWDAWSSL GDMTKEEAMI AYVEEMKKII ETMPMTEKVE 180
  181 ELLHVIGPFY EIVEDKKSSK SSDLTSDLGN VLTSSNAKAV NGKAESSDSG AESEEEEAQE 240
  241 ELKGAEQSGS DDKKTLKKSA DKNLEIIVTN GYKGSFVQDI QSDIHTDSSR STRSSEDEKP 300
  301 GDESSQQTGH TIVCAHQDRN EDPSEDASGI HHLTSDSDSE VYCDSMEQFG QEEYYLGGDP 360
  361 TQHLESSGFC EDAQQSPGNG SIGKMWMVAV KGKGEVKHGG EDGRSSSGAP HRETRGGESE 420
  421 DFSSVRRGRG NRIPHLSEGP KGRQVGSGGD GERWGSDRGS RGSLNEQIAL VLIRLQEDMQ 480
  481 NVLQRLHKLE TLTASQAKLS LQTSNQPSSQ RPAWWPFEMS PGALAFAIIW PFIAQWLAHL 540
  541 YYQRRRRKLN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle