YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21707747, gi\|...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.94
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MICAFLRVVQ HAEKLHGSLG RQLLPHFVFT KACFKTQPLR WGLREQKITV QPRTVLRFTQ  60
   61 KTFWTQGPDP RKAKEDSTKQ VSIRRNQREE TGVSMSQKVR EAGRDVSYLI VVLFGVGLTG 120
  121 GLLYAIFKEL FFSSSPNIIY GKALGKCRTH PEVIGVFGEP LKGYGEMSRR GRRQHVRFSE 180
  181 YVNNGLKRIR VKFYIEGSEP GKQGTVHAEV EENPGSGQFE FRYIFVEVTP TRSIIVEDNR 240
  241 SEQS

Type	Start	End	Confidence
Cytoplasmic	1	105	0.98
Transmembrane Helix	106	127	0.94
Non-Cytoplasmic	128	244	0.99