YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ERG28_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRFLNVLRS WLVMVSIIAM GNTLQSFRDH TFLYEKLYTG KPNLVNGLQA RTFGIWTLLS  60
   61 SVIRCLCAID IHNKTLYHIT LWTFLLALGH FLSELFVFGT AAPTVGVLAP LMVASFSILG 120
  121 MLVGLRYLEA EPVSRQKKRN

Type	Start	End	Confidence
Cytoplasmic	1	6	0.94
Transmembrane Helix	7	27	0.89
Non-Cytoplasmic	28	47	0.93
Transmembrane Helix	48	68	0.89
Cytoplasmic	69	77	0.78
Transmembrane Helix	78	98	0.90
Non-Cytoplasmic	99	106	0.68
Transmembrane Helix	107	128	0.92
Cytoplasmic	129	140	0.96