YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COL10_MOUSE
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNGFRVLLRS NLSMLLLLAL LHFQSLGLDV DSRSAAEVCA THTISPGPKG DDGERGDTGE  60
   61 EGKDGKVGRQ GPKGVKGELG DMGAQGNIGK SGPIGKKGDK GEKGLLGIPG EKGKAGTICD 120
  121 CGRYRKVVGQ LDISVARLKT SMKFIKNVIA GIRETEEKFY YIVQEEKNYR ESLTHCRIRG 180
  181 GMLAMPKDEV VNTLIADYVA KSGFFRVFIG VNDLEREGQY VFTDNTPLQN YSNWKEEEPS 240
  241 DPSGHEDCVE MLSSGRWNDT ECHLTMYFVC EFVKKKK

Type	Start	End	Confidence
Signal Peptide	1	27	0.99
N-region	1	18
H-region	19	24
C-region	25	27
Cleavage Site	27	28
Non-Cytoplasmic	28	277	0.99